Biology 生物学

Plankton Observation Discussion Examples | Classification, Population Density, Dominance, and Sources of Error

Plankton observation is an experiment in which microscopic organisms drifting in ponds, lakes, rivers, seas, and other bodies of water are collected and examined under a microscope to investigate their morphology and abundance. Plankton are important groups of organisms that support aquatic food webs and nutrient cycling, and they are also used as indicators that reflect water quality and seasonal changes.

Plankton are broadly divided into phytoplankton and zooplankton. Phytoplankton perform photosynthesis and function as primary producers in aquatic ecosystems. Zooplankton feed on phytoplankton, bacteria, other small animals, and organic matter, and in turn serve as food for fish and other organisms.

During observation, record the shape, size, color, movement, colony formation, and the presence or absence of shells, spines, or other structures. By counting organisms in a known volume, population density and the proportion of each taxonomic group can also be calculated.

However, plankton distribution varies with water depth, light, current, water temperature, nutrients, sampling time, weather, and other factors. Therefore, it is important not to assume that a single sample represents the entire water body and to record sampling conditions clearly.

This article assumes a basic freshwater plankton observation exercise conducted at school or university and presents an introduction, precautions, items to record, example experimental values, calculations, sources of error, example results, and example discussion in that order.

Note:

This article is a study reference for preparing biology and ecology laboratory reports. The taxonomic groups, organism counts, cell counts, occurrence frequencies, dominance values, and other data shown here are illustrative examples and are not actual measurements from a specific pond or river.

Collect water or use a plankton net only in safe locations with permission from the school, facility, or land manager. Do not approach deep water, rapid currents, flooded areas, or restricted zones.

Do not drink collected water or allow it to contact your eyes or open wounds. Wash your hands after observation.

Do not release collected organisms into a different body of water. Dispose of samples after observation according to the instructions of your instructor or facility.

If fixatives or stains are used, follow the reagent instructions, safety data sheets, and your instructor’s directions.

Begin microscopic observation at low magnification and take care not to let the objective lens touch the slide.

If identification to species level is not possible, do not force a species name. Record the organism at the genus, family, or broader group level, such as diatoms, green algae, or rotifers.

Basics of Plankton Observation

Phytoplankton

Phytoplankton are microscopic organisms that produce organic matter through photosynthesis. In freshwater, commonly observed groups include diatoms, green algae, cyanobacteria, and euglenoids.

Zooplankton

Zooplankton are organisms that drift in water while feeding on other organisms or organic matter. In freshwater, rotifers, cladocerans such as Daphnia, copepods, and protists are commonly observed.

Water Sampling

Directly collecting water in a container is suitable for evaluating small plankton and their concentration in the water. A plankton net, on the other hand, can concentrate relatively large plankton from a large volume of water.

Microscopic Observation

First examine the entire sample at low magnification, then increase the magnification after locating the target organism. Observe morphology, size, color, movement, colonies, cell walls, flagella, shells, spines, and other features.

Quantitative Observation

Count the number of cells or individuals in a known sample volume and convert the result to population density per 1 mL, per 1 L, or another standard volume.

Main Items to Record in the Results

  • Sampling date
  • Sampling time
  • Sampling location
  • Weather
  • Air temperature
  • Water temperature
  • Water depth
  • Water transparency
  • Water color
  • Odor
  • Presence or absence of current
  • Sampling method
  • Sample volume
  • Plankton net mesh size
  • Volume before concentration
  • Volume after concentration
  • Observation magnification
  • Sample volume observed
  • Number of fields of view observed
  • Taxonomic group
  • Estimated species or genus
  • Phytoplankton or zooplankton
  • Morphological characteristics
  • Cell or organism size
  • Presence or absence of movement
  • Presence or absence of colony formation
  • Count for each taxonomic group
  • Total organism count
  • Population density
  • Relative dominance
  • Frequency of occurrence
  • Number of species or taxonomic groups
  • Dominant taxonomic group
  • Replicate measurements
  • Mean
  • Standard deviation

Example Experimental Values

Overview of Sampling Sites

Site Environment Characteristics
Site A Flowing stream High transparency and many stones on the bottom
Site B Park pond Little current and abundant aquatic vegetation
Site C Agricultural canal Gentle current with farmland nearby

Examples of Observed Taxonomic Groups

Taxonomic group Category Main observed characteristics
Diatoms Phytoplankton Yellow-brown color, glass-like frustules, bilateral symmetry or circular form
Green algae Phytoplankton Green, unicellular or colonial
Cyanobacteria Phytoplankton Blue-green, filamentous or colonial
Euglenoids Phytoplankton Green, elongated body, flagellar movement
Rotifers Zooplankton Ciliated corona at the head and wheel-like movement
Cladocerans (Daphnia) Zooplankton Transparent carapace, large antennae, jumping movement
Copepods Zooplankton Elongated body, long antennae, intermittent swimming
Ciliates Protists Cilia covering the body surface and active movement

Example Counts by Site

Taxonomic group Site A Site B Site C
Diatoms 82 46 68
Green algae 24 118 73
Cyanobacteria 6 94 38
Euglenoids 3 32 21
Rotifers 18 64 39
Cladocerans 5 27 12
Copepods 9 21 16
Ciliates 11 48 25
Total 158 450 292

Replicate Counts for Site B

Replicate Total count Observed volume
1 146 0.10 mL
2 151 0.10 mL
3 153 0.10 mL
Mean 150 0.10 mL

Example Seasonal Values

Season Phytoplankton (organisms/mL) Zooplankton (organisms/mL) Dominant group
Spring 820 140 Diatoms
Summer 2150 310 Green algae and cyanobacteria
Autumn 1240 220 Green algae
Winter 430 70 Diatoms

Example Relationship with Water Quality

Parameter Site A Site B Site C
Water temperature 17.8°C 24.2°C 21.5°C
pH 7.1 8.4 7.7
Dissolved oxygen 9.2 mg/L 6.0 mg/L 7.1 mg/L
COD 1.6 mg/L 6.8 mg/L 4.2 mg/L
Phosphate phosphorus 0.018 mg/L 0.145 mg/L 0.082 mg/L

Calculation Methods

Number of Organisms per mL

If 150 organisms are observed in 0.10 mL:

Population density = number observed ÷ observed volume

= 150 ÷ 0.10

= 1500 organisms/mL

Number of Organisms per L

1 L = 1000 mL

1500 organisms/mL × 1000

= 1.5 × 106 organisms/L

Concentration Factor

If 500 mL of original water is concentrated to 10 mL:

Concentration factor = volume before concentration ÷ volume after concentration

= 500 ÷ 10

= 50-fold

Population Density in the Original Water

If the concentrated sample contains 1500 organisms/mL and the concentration factor is 50:

Density in original water = density in concentrated sample ÷ concentration factor

= 1500 ÷ 50

= 30 organisms/mL

Relative Dominance

If Site B contains 118 green algae out of 450 total organisms:

Relative dominance (%) = number in taxonomic group ÷ total number × 100

= 118 ÷ 450 × 100

≈ 26.2%

Frequency of Occurrence

If diatoms are observed in 8 of 10 fields:

Frequency of occurrence (%) = fields with occurrence ÷ total fields observed × 100

= 8 ÷ 10 × 100

= 80%

Mean Count

If replicate counts are 146, 151, and 153:

Mean = (146 + 151 + 153) ÷ 3

= 150 organisms

Standard Deviation

s = √{Σ(xi − x̄)2 ÷ (n − 1)}

≈ 3.6 organisms

Coefficient of Variation

Coefficient of variation (%) = standard deviation ÷ mean × 100

= 3.6 ÷ 150 × 100

≈ 2.4%

Proportions of Phytoplankton and Zooplankton

If Site B contains 290 phytoplankton and 160 zooplankton:

Phytoplankton proportion = 290 ÷ 450 × 100 ≈ 64.4%

Zooplankton proportion = 160 ÷ 450 × 100 ≈ 35.6%

Rate of Increase Between Sites

If the total count is 158 at Site A and 450 at Site B:

Increase (%) = (450 − 158) ÷ 158 × 100

≈ 185%

A Simple View of Species Diversity

For a simple comparison, the number of observed species or taxonomic groups can be reported. If differences in abundance are also considered, an index such as the Shannon index can be used.

H’ = −Σpi ln pi

Here, pi is the proportion obtained by dividing the abundance of each taxonomic group by the total abundance.

Main Sources of Error

Source of error Effect on results Improvement
Variation in sampling location Local distribution differences affect results Record the location and sample at the same point
Different sampling depths Species and abundance differ between surface and deeper water Standardize sampling depth
Different sampling times Diel migration changes distribution Compare samples taken at the same time of day
Different weather or sunlight Photosynthesis and vertical distribution change Record weather and sunlight
Sampling after rainfall Dilution and runoff alter the community Record recent rainfall
Insufficient mixing Organisms are unevenly distributed in the sample Mix gently enough to avoid damaging organisms
Different sample volumes Abundance comparisons become inaccurate Standardize sample volume
Different net mesh sizes Capture efficiency for small species changes Use the same mesh size
Clogged net Filtration efficiency decreases Avoid excessively long towing and clean the net
Sample loss during concentration Abundance is underestimated Rinse organisms from container walls
Adhesion to containers Large organisms or colonies may be missed Inspect the inner walls of the container
Long delay after collection Predation, death, or reproduction may occur Observe samples promptly
Different storage temperatures Motility and morphology change Store under consistent conditions
Deformation caused by fixation Species identification becomes difficult Combine live and fixed observations
Uneven distribution on the slide Organisms concentrate in some fields Homogenize the sample and observe multiple fields
Pressure from the coverslip Large organisms deform or break Use spacers or a small sample volume
Too few fields observed Random bias increases Observe many randomly selected fields
Counting the same organism twice Abundance is overestimated Move the field systematically in one direction
Inconsistent treatment of boundary organisms Results differ among observers Establish a rule for organisms on field boundaries
Movement of motile organisms Double counting or omissions occur Count quickly using a consistent procedure
Misidentification Taxonomic composition is distorted Use identification guides and multiple characteristics
Confusion of similar species Dominant species may be misidentified Record at genus or higher taxonomic level
Missing small organisms Small species are underestimated Observe at different magnifications
Missing transparent organisms Zooplankton counts appear too low Adjust the diaphragm and illumination
Different definitions of a colony as one organism Cell counts and colony counts become mixed Clearly state the counting unit
Error in concentration-factor calculation Density in original water is incorrect Record volumes before and after concentration
Incorrect observed volume Density conversion is incorrect Check the counting chamber and sample volume
Too few replicates Variation cannot be evaluated Perform multiple counts
Ignoring seasonal differences A temporary community is generalized Continue observations across seasons
Surveying only one site The entire water body is not represented Compare multiple sites

Example Results

Water samples were collected from Site A, a flowing stream; Site B, a park pond; and Site C, an agricultural canal, and plankton were observed under a microscope.

At Site A, 158 organisms from eight taxonomic groups were observed, with diatoms being the most abundant at 82 organisms.

At Site B, 450 organisms from eight taxonomic groups were observed. Green algae (118), cyanobacteria (94), and rotifers (64) were abundant.

At Site C, 292 organisms from eight taxonomic groups were observed, with green algae (73) and diatoms (68) being abundant.

The mean count in 0.10 mL at Site B was 150 organisms, corresponding to a population density of 1500 organisms/mL in the concentrated sample.

The relative dominance of green algae at Site B was 26.2%.

The main groups were diatoms at Site A, green algae and cyanobacteria at Site B, and green algae and diatoms at Site C.

Example Discussion

In this experiment, water samples were collected from three sites with different environmental conditions, and the taxonomic composition and abundance of phytoplankton and zooplankton were compared.

At Site A, diatoms were the most abundant group, with 82 organisms, accounting for approximately 51.9% of the total 158 organisms.

Site A was a flowing stream with relatively low water temperature, high transparency, and low COD and phosphate phosphorus concentrations.

Some diatoms are commonly found in relatively clean flowing waters. The dominance of diatoms at Site A may therefore be related to the flowing environment and relatively low nutrient loading.

However, some diatom species prefer eutrophic waters, so water quality cannot be determined solely from the abundance of diatoms.

At Site B, green algae (118) and cyanobacteria (94) were abundant, and the total count of 450 organisms was the highest among the three sites.

Site B was a low-flow pond with a water temperature of 24.2°C, pH 8.4, COD 6.8 mg/L, and phosphate phosphorus 0.145 mg/L.

In low-flow waters, plankton are less likely to be carried downstream and can accumulate. Under conditions of high water temperature and nutrient concentrations, green algae and cyanobacteria can proliferate readily.

The high pH at Site B may have been influenced by carbon dioxide consumption through phytoplankton photosynthesis.

In contrast, dissolved oxygen at Site B was 6.0 mg/L, lower than at Site A. Photosynthesis can increase oxygen during the day, whereas respiration by plankton and microorganisms consumes oxygen at night.

In ponds with abundant phytoplankton, dissolved oxygen may fall substantially at night or early in the morning, so measurements at different times of day are needed.

Zooplankton were also abundant at Site B, including 64 rotifers, 27 cladocerans, and 21 copepods.

The abundance of phytoplankton may have supported an increase in zooplankton that feed on them.

However, zooplankton abundance is also affected by fish predation, water temperature, the size of available phytoplankton, diel vertical migration, and other factors.

At Site C, green algae (73) and diatoms (68) were abundant, with a total count of 292 organisms.

Site C was an agricultural canal with higher nutrient concentrations than Site A but more current than Site B.

Nitrogen and phosphorus runoff from surrounding farmland may have promoted phytoplankton growth. At the same time, flowing water may have transported plankton away, preventing them from accumulating to densities as high as those at Site B.

Across the three sites, the total abundance was highest at low-flow Site B and was approximately 2.85 times that at Site A.

This difference likely reflects the combined effects of water temperature, nutrients, current, residence time, light conditions, and other factors.

The relative dominance of green algae at Site B was 26.2%, and no single taxonomic group accounted for more than half of the organisms.

This suggests that multiple groups of phytoplankton and zooplankton coexisted at Site B.

However, communities with the same number of observed taxonomic groups can differ in diversity if one group dominates strongly in one community while abundance is distributed more evenly in another.

Therefore, detailed comparisons of diversity should use not only taxonomic richness but also indices such as the Shannon index.

In replicate counts at Site B, the mean was 150 organisms, the standard deviation was approximately 3.6 organisms, and the coefficient of variation was approximately 2.4%.

Because variation among replicates was relatively small, the sample on the slide was probably reasonably uniform and counting reproducibility was good.

Nevertheless, plankton can sink, float, or swim within a container, so counts can change depending on how the sample is mixed immediately before subsampling.

Large cladocerans and colonial algae tend to be unevenly distributed, making gentle mixing and repeated counting important.

When a plankton net is used, organisms smaller than the mesh pass through it, so larger species may be overrepresented relative to the actual community.

Direct water sampling includes smaller species but may make rare large zooplankton harder to detect.

Thus, differences in sampling method must be considered when interpreting community composition.

Errors may also occur during species identification. In particular, morphologically similar green algae and diatoms may not be identifiable to species level by brief light-microscope observation alone.

Uncertain organisms should be recorded at the genus or higher taxonomic level rather than being assigned a species name without sufficient evidence.

In the example seasonal values, both phytoplankton and zooplankton were most abundant in summer.

Higher water temperatures and greater solar radiation in summer can promote photosynthesis and growth, leading to increased phytoplankton abundance.

As phytoplankton increase, zooplankton that feed on them may increase after a time lag.

In winter, low water temperatures and shorter daylight hours can reduce growth rates and lead to lower abundance.

However, some diatoms dominate during cold periods, so seasonal changes cannot be explained by water temperature alone.

Overall, Site A had abundant diatoms, reflecting a relatively low-nutrient flowing environment, whereas green algae and cyanobacteria increased at Site B under conditions of high water temperature, high nutrient availability, and long residence time.

At Site C, both nutrient supply from farmland and water flow likely influenced the community, resulting in abundant green algae and diatoms.

Accurate assessment of plankton communities requires seasonal and time-of-day surveys at the same site, sampling at multiple depths, simultaneous water-quality measurements, and standardized sampling methods.

Example Discussion When Cyanobacteria Are Abundant

Possible causes of abundant cyanobacteria include high water temperature, stagnant water, and increased nitrogen and phosphorus. Water discoloration, odor, pH, and nutrient concentrations should be examined together, and seasonal and sampling-time changes should also be considered.

Example Discussion When Zooplankton Are Scarce

Possible causes of low zooplankton abundance include fish predation, insufficient phytoplankton food, plankton-net mesh size, sampling time, and uneven distribution caused by swimming behavior. Sampling at multiple times and locations is necessary.

Example Discussion When Counts Vary Widely in the Same Sample

Large variation among replicate counts may result from insufficient mixing, settling, swimming, colony formation, or selection of microscope fields. The sample should be gently homogenized and many randomly selected fields should be observed.

Example Discussion When the Number of Taxonomic Groups Is the Same Between Sites

Even if sites contain the same number of taxonomic groups, their community structures are not necessarily the same if the relative abundances of those groups differ. Comparisons should therefore include relative dominance and diversity indices, not only taxonomic richness.

Example Discussion When Identification to Species Level Is Not Possible

With a light microscope, subtle morphological differences among closely related species may not be visible. Therefore, this observation recorded uncertain organisms at the genus or broader taxonomic level rather than forcing a species identification. More accurate identification may require higher-magnification observation, specialized identification keys, electron microscopy, or genetic analysis.

Summary

In plankton observation, morphology, movement, size, color, colony formation, and other characteristics are recorded to classify phytoplankton and zooplankton.

By counting organisms in a known volume, population density, relative dominance, and frequency of occurrence can be calculated.

Plankton communities are influenced by water temperature, light, current, nutrients, water quality, season, sampling time, and other factors.

Sampling methods and plankton-net mesh size can bias the taxonomic groups observed.

To obtain reliable results, sampling conditions should be standardized and observations should be repeated across multiple sites, times, and microscope fields.